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fastDNAml_1.2.2p
- fastDNAml is an attempt to solve the same problem as DNAML, but to do so faster and using less memory, so that larger trees and/or more bootstrap replicates become tractable. Much of fastDNAml is merely a recoding of the PHYLIP 3.3 DNAML progra
tree
- 我在此介绍几个进化树分析及其相关软件的使用和应用范围。这几个软件分别是PHYLIP、PUZZLE、PAUP、TREEVIEW、CLUSTALX和PHYLO-WIN（LINUX）。-I would like to introduce some evolutionary tree analysis and related software use and applications. This is some software PHYLIP, PUZZLE, PAUP, TREEVIEW, CLUST
phylip
- 这篇文章，详细的介绍了当前国际最流行的 生物进化树软件使用说明，中文版！-This article, a detailed introduction of the current international the most popular biology evolutionary tree software to use that version of English!
genexp
- Java语言编写的生物信息学综合工具软件，它提供了一个统一的界面调用ncbi-blast、clustalw、几个phylip程序、chromtree和treeview 程序，还提供了多序列比对编辑等其他功能。需要安装Java环境、biojava 1.4p1，2.6M，及以上各个独立程序。-Written in Java language integrated bioinformatics tools, which provides a unified interface called ncbi-
seaview4
- 图形化多序列比对编辑器,能够读各种比对格式(MSF, CLUSTAL, FASTA, PHYLIP, MASE),可手动编辑队列。-Graphical multiple sequence alignment editor, able to read various alignment formats (MSF, CLUSTAL, FASTA, PHYLIP, MASE), you can manually edit the queue.
ugene_1_7_0_win_x86
- UGENE is a free cross-platform genome analysis suite. Main features: Multiple sequence alignment using MUSCLE 3,4 and KAlign HMM profiles build and search, based on the source of HMMER 2 and HMMER 3 PCR Primers design using Primer 3 Pr
mbetoolbox_dnapars
- 该matlab程序用于DNA约简，内涵GUI-his package includes a modified version of dnapars.exe Phylip 3.6. The orignal dnapars,exe uses a menu for settings of parameters. I changed it into a command-line driven one, called mbetoolbox_dnapars.exe.
mdist2phylip
- 将一般距离矩阵转换成phylip矩阵的perl脚本。(martix to phylip martix)