文件名称:NAMD_CVS_Source.tar
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高性能计算之CUDA编程的NAMD(用于在大规模并行计算机上快速模拟大分子体系的并行分子动力)原码-The high-performance computing CUDA programming NAMD (used in large-scale parallel computer system for fast simulation of large molecules parallel molecular dynamics) of the original code
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下载文件列表
NAMD_CVS_Source/
NAMD_CVS_Source/Makefile
NAMD_CVS_Source/license.txt
NAMD_CVS_Source/dpmta-2.6/
NAMD_CVS_Source/dpmta-2.6/Makefile
NAMD_CVS_Source/dpmta-2.6/README
NAMD_CVS_Source/dpmta-2.6/mpole/
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_misc.c
NAMD_CVS_Source/dpmta-2.6/mpole/Makefile
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_allocLJ.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_mpoleC.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_testC.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_allocC.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_fft.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe.h
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_legendre.h
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_fftC.h
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_testLJ.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_mpoleLJ.c
NAMD_CVS_Source/dpmta-2.6/src/
NAMD_CVS_Source/dpmta-2.6/src/Makefile
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmacro.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmkil.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvpcalc.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvstart.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_timer.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmkiil.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvclean.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmkil.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_timer.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test2.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_mastiface.c
NAMD_CVS_Source/dpmta-2.6/src/README
NAMD_CVS_Source/dpmta-2.6/src/dpmta_testdump.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmkcell.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slave.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvcomm.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slave.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_error.c
NAMD_CVS_Source/dpmta-2.6/src/Makefile.converse
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test2b.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test3.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_mastiter.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_direct.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test5.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test4.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_cell.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmkhl.c
NAMD_CVS_Source/dpmta-2.6/src/Makefile.cray
NAMD_CVS_Source/dpmta-2.6/src/dpmta_mastinit.c
NAMD_CVS_Source/dpmta-2.6/src/Makefile.serial
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmcalc.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_t3dlib.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_distmisc.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_serial.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_version.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_pvm.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvcompute.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvscale.c
NAMD_CVS_Source/dpmta-2.6/README.HPPA
NAMD_CVS_Source/lib/
NAMD_CVS_Source/lib/ramd/
NAMD_CVS_Source/lib/ramd/README
NAMD_CVS_Source/lib/ramd/examples/
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.tCouple.pdb
NAMD_CVS_Source/lib/ramd/examples/FFTW_NAMD_CVS_Linux-x86_64.txt
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.ramd-md.namdin
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.emd2.rst
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.ramd.namdin
NAMD_CVS_Source/lib/ramd/examples/example_ramd-md_output/
NAMD_CVS_Source/lib/ramd/examples/example_ramd-md_output/example_ramd-md.namdout
NAMD_CVS_Source/lib/ramd/examples/run_ramd_example.sh
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.pdb
NAMD_CVS_Source/lib/ramd/examples/example_ramd_output/
NAMD_CVS_Source/lib/ramd/examples/example_ramd_output/dhaawt_DCL.ramd.cdcd
NAMD_CVS_Source/lib/ramd/examples/example_ramd_output/example_ramd.namdout
NAMD_CVS_Source/lib/ramd/examples/run_ramd-md_example.sh
NAMD_CVS_Source/lib/ramd/examples/README.examples
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.top
NAMD_CVS_Source/lib/ramd/scripts/
NAMD_CVS_Source/lib/ramd/scripts/ramd-4.0.tcl
NAMD_CVS_Source/lib/ramd/scripts/vectors.tcl
NAMD_CVS_Source/lib/ramd/scripts/ramd-4.0_script.tcl
NAMD_CVS_Source/lib/abf/
NAMD_CVS_Source/lib/abf/distance-com.tcl
NAMD_CVS_Source/lib/abf/zCoord.tcl
NAMD_CVS_Source/lib/abf/abf_script.tcl
NAMD_CVS_Source/lib/abf/vectors.tcl
NAMD_CVS_Source/lib/abf/xyDistance.tcl
NAMD_CVS_Source/lib/abf/zCoord-1atom.tcl
NAMD_CVS_Source/lib/abf/distance.tcl
NAMD_CVS_Source/lib/abf/pkgIndex.tcl
NAMD_CVS_Source/lib/abf/abscissa.tcl
NAMD_CVS_Source/lib/abf/abf.tcl
NAMD_CVS_Source/lib/replica/
NAMD_CVS_Source/lib/replica/clone_reps.vmd
NAMD_CVS_Source/lib/replica/example/
NAMD_CVS_Source/lib/replica/example/alanin.params
NAMD_CVS_Source/lib/replica/example/restart_1.conf
NAMD_CVS_Source/lib/replica/example/alanin.pdb
NAMD_CVS_Source/lib/replica/example/unfolded.pdb
NAMD_CVS_Source/lib/replica/example/fold_alanin.conf
NAMD_CVS_Source/lib/replica/example/alanin.psf
NAMD_CVS_Source/lib/replica/example/load_all.vmd
NAMD_CVS_Source/lib/replica/example/alanin_base.namd
NAMD_CVS_Source/lib/replica/show_replicas.vmd
NAMD_CVS_Source/lib/replica/README.txt
NAMD_CVS_Source/lib/replica/namd_replica_server.tcl
NAMD_CVS_Source/lib/replica/replica_exchange.tcl
NAMD_CVS_Source/lib/replica/spawn_namd.tcl
NAMD_CVS_Source/lib/colvars/
NAMD_CVS_Source/lib/colvars/colvarproxy_standalone.C
NAMD_CVS_Source/lib/colvars/colvarproxy_standalone.h
NAMD_CVS_Source/lib/i
NAMD_CVS_Source/Makefile
NAMD_CVS_Source/license.txt
NAMD_CVS_Source/dpmta-2.6/
NAMD_CVS_Source/dpmta-2.6/Makefile
NAMD_CVS_Source/dpmta-2.6/README
NAMD_CVS_Source/dpmta-2.6/mpole/
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_misc.c
NAMD_CVS_Source/dpmta-2.6/mpole/Makefile
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_allocLJ.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_mpoleC.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_testC.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_allocC.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_fft.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe.h
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_legendre.h
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_fftC.h
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_testLJ.c
NAMD_CVS_Source/dpmta-2.6/mpole/mpe_mpoleLJ.c
NAMD_CVS_Source/dpmta-2.6/src/
NAMD_CVS_Source/dpmta-2.6/src/Makefile
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmacro.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmkil.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvpcalc.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvstart.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_timer.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmkiil.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvclean.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmkil.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_timer.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test2.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_mastiface.c
NAMD_CVS_Source/dpmta-2.6/src/README
NAMD_CVS_Source/dpmta-2.6/src/dpmta_testdump.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmkcell.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slave.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvcomm.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slave.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_error.c
NAMD_CVS_Source/dpmta-2.6/src/Makefile.converse
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test2b.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test3.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_mastiter.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_direct.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test5.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test4.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_cell.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmkhl.c
NAMD_CVS_Source/dpmta-2.6/src/Makefile.cray
NAMD_CVS_Source/dpmta-2.6/src/dpmta_mastinit.c
NAMD_CVS_Source/dpmta-2.6/src/Makefile.serial
NAMD_CVS_Source/dpmta-2.6/src/dpmta_test.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvmcalc.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_t3dlib.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_distmisc.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_serial.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta_version.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_pvm.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvcompute.c
NAMD_CVS_Source/dpmta-2.6/src/dpmta.h
NAMD_CVS_Source/dpmta-2.6/src/dpmta_slvscale.c
NAMD_CVS_Source/dpmta-2.6/README.HPPA
NAMD_CVS_Source/lib/
NAMD_CVS_Source/lib/ramd/
NAMD_CVS_Source/lib/ramd/README
NAMD_CVS_Source/lib/ramd/examples/
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.tCouple.pdb
NAMD_CVS_Source/lib/ramd/examples/FFTW_NAMD_CVS_Linux-x86_64.txt
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.ramd-md.namdin
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.emd2.rst
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.ramd.namdin
NAMD_CVS_Source/lib/ramd/examples/example_ramd-md_output/
NAMD_CVS_Source/lib/ramd/examples/example_ramd-md_output/example_ramd-md.namdout
NAMD_CVS_Source/lib/ramd/examples/run_ramd_example.sh
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.pdb
NAMD_CVS_Source/lib/ramd/examples/example_ramd_output/
NAMD_CVS_Source/lib/ramd/examples/example_ramd_output/dhaawt_DCL.ramd.cdcd
NAMD_CVS_Source/lib/ramd/examples/example_ramd_output/example_ramd.namdout
NAMD_CVS_Source/lib/ramd/examples/run_ramd-md_example.sh
NAMD_CVS_Source/lib/ramd/examples/README.examples
NAMD_CVS_Source/lib/ramd/examples/dhaawt_DCL.top
NAMD_CVS_Source/lib/ramd/scripts/
NAMD_CVS_Source/lib/ramd/scripts/ramd-4.0.tcl
NAMD_CVS_Source/lib/ramd/scripts/vectors.tcl
NAMD_CVS_Source/lib/ramd/scripts/ramd-4.0_script.tcl
NAMD_CVS_Source/lib/abf/
NAMD_CVS_Source/lib/abf/distance-com.tcl
NAMD_CVS_Source/lib/abf/zCoord.tcl
NAMD_CVS_Source/lib/abf/abf_script.tcl
NAMD_CVS_Source/lib/abf/vectors.tcl
NAMD_CVS_Source/lib/abf/xyDistance.tcl
NAMD_CVS_Source/lib/abf/zCoord-1atom.tcl
NAMD_CVS_Source/lib/abf/distance.tcl
NAMD_CVS_Source/lib/abf/pkgIndex.tcl
NAMD_CVS_Source/lib/abf/abscissa.tcl
NAMD_CVS_Source/lib/abf/abf.tcl
NAMD_CVS_Source/lib/replica/
NAMD_CVS_Source/lib/replica/clone_reps.vmd
NAMD_CVS_Source/lib/replica/example/
NAMD_CVS_Source/lib/replica/example/alanin.params
NAMD_CVS_Source/lib/replica/example/restart_1.conf
NAMD_CVS_Source/lib/replica/example/alanin.pdb
NAMD_CVS_Source/lib/replica/example/unfolded.pdb
NAMD_CVS_Source/lib/replica/example/fold_alanin.conf
NAMD_CVS_Source/lib/replica/example/alanin.psf
NAMD_CVS_Source/lib/replica/example/load_all.vmd
NAMD_CVS_Source/lib/replica/example/alanin_base.namd
NAMD_CVS_Source/lib/replica/show_replicas.vmd
NAMD_CVS_Source/lib/replica/README.txt
NAMD_CVS_Source/lib/replica/namd_replica_server.tcl
NAMD_CVS_Source/lib/replica/replica_exchange.tcl
NAMD_CVS_Source/lib/replica/spawn_namd.tcl
NAMD_CVS_Source/lib/colvars/
NAMD_CVS_Source/lib/colvars/colvarproxy_standalone.C
NAMD_CVS_Source/lib/colvars/colvarproxy_standalone.h
NAMD_CVS_Source/lib/i
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