ViennaRNA-1.8.5/
ViennaRNA-1.8.5/config.sub
ViennaRNA-1.8.5/configure
ViennaRNA-1.8.5/acinclude.m4
ViennaRNA-1.8.5/Progs/
ViennaRNA-1.8.5/Progs/RNAfold.c
ViennaRNA-1.8.5/Progs/Makefile.am
ViennaRNA-1.8.5/Progs/RNAcofold.c
ViennaRNA-1.8.5/Progs/RNAdistance.c
ViennaRNA-1.8.5/Progs/Makefile.in
ViennaRNA-1.8.5/Progs/RNAplfold.c
ViennaRNA-1.8.5/Progs/RNAplot.c
ViennaRNA-1.8.5/Progs/RNApaln.c
ViennaRNA-1.8.5/Progs/RNALfold.c
ViennaRNA-1.8.5/Progs/RNAaliduplex.c
ViennaRNA-1.8.5/Progs/RNAinverse.c
ViennaRNA-1.8.5/Progs/RNAalifold.c
ViennaRNA-1.8.5/Progs/RNAduplex.c
ViennaRNA-1.8.5/Progs/RNApdist.c
ViennaRNA-1.8.5/Progs/RNAheat.c
ViennaRNA-1.8.5/Progs/RNAeval.c
ViennaRNA-1.8.5/Progs/RNAup.c
ViennaRNA-1.8.5/Progs/RNAsubopt.c
ViennaRNA-1.8.5/aclocal.m4
ViennaRNA-1.8.5/THANKS
ViennaRNA-1.8.5/H/
ViennaRNA-1.8.5/H/fold.h
ViennaRNA-1.8.5/H/ProfileAln.h
ViennaRNA-1.8.5/H/inverse.h
ViennaRNA-1.8.5/H/part_func_up.h
ViennaRNA-1.8.5/H/Makefile.am
ViennaRNA-1.8.5/H/params.h
ViennaRNA-1.8.5/H/Makefile.in
ViennaRNA-1.8.5/H/duplex.h
ViennaRNA-1.8.5/H/LPfold.h
ViennaRNA-1.8.5/H/utils.h
ViennaRNA-1.8.5/H/alifold.h
ViennaRNA-1.8.5/H/MEA.h
ViennaRNA-1.8.5/H/treedist.h
ViennaRNA-1.8.5/H/Lfold.h
ViennaRNA-1.8.5/H/energy_par.h
ViennaRNA-1.8.5/H/fold_vars.h
ViennaRNA-1.8.5/H/findpath.h
ViennaRNA-1.8.5/H/edit_cost.h
ViennaRNA-1.8.5/H/cofold.h
ViennaRNA-1.8.5/H/profiledist.h
ViennaRNA-1.8.5/H/part_func.h
ViennaRNA-1.8.5/H/part_func_co.h
ViennaRNA-1.8.5/H/RNAstruct.h
ViennaRNA-1.8.5/H/pair_mat.h
ViennaRNA-1.8.5/H/ribo.h
ViennaRNA-1.8.5/H/PS_dot.h
ViennaRNA-1.8.5/H/aln_util.h
ViennaRNA-1.8.5/H/subopt.h
ViennaRNA-1.8.5/H/energy_const.h
ViennaRNA-1.8.5/H/dist_vars.h
ViennaRNA-1.8.5/H/stringdist.h
ViennaRNA-1.8.5/Kinfold/
ViennaRNA-1.8.5/Kinfold/configure
ViennaRNA-1.8.5/Kinfold/acinclude.m4
ViennaRNA-1.8.5/Kinfold/aclocal.m4
ViennaRNA-1.8.5/Kinfold/cmdline.h
ViennaRNA-1.8.5/Kinfold/Makefile.am
ViennaRNA-1.8.5/Kinfold/nachbar.h
ViennaRNA-1.8.5/Kinfold/NEWS
ViennaRNA-1.8.5/Kinfold/INSTALL
ViennaRNA-1.8.5/Kinfold/globals.c
ViennaRNA-1.8.5/Kinfold/ChangeLog
ViennaRNA-1.8.5/Kinfold/main.c
ViennaRNA-1.8.5/Kinfold/kinfold.ggo
ViennaRNA-1.8.5/Kinfold/Example/
ViennaRNA-1.8.5/Kinfold/Example/Makefile.am
ViennaRNA-1.8.5/Kinfold/Example/hpin.e.log
ViennaRNA-1.8.5/Kinfold/Example/hpin.log
ViennaRNA-1.8.5/Kinfold/Example/Makefile.in
ViennaRNA-1.8.5/Kinfold/Example/hpin.nolp.log
ViennaRNA-1.8.5/Kinfold/Example/traj.nolp
ViennaRNA-1.8.5/Kinfold/Example/README
ViennaRNA-1.8.5/Kinfold/Example/traj.ae
ViennaRNA-1.8.5/Kinfold/Example/traj
ViennaRNA-1.8.5/Kinfold/Example/hpin.in
ViennaRNA-1.8.5/Kinfold/Example/hpin.ae.log
ViennaRNA-1.8.5/Kinfold/Example/traj.e
ViennaRNA-1.8.5/Kinfold/Makefile.in
ViennaRNA-1.8.5/Kinfold/cache_util.h
ViennaRNA-1.8.5/Kinfold/README
ViennaRNA-1.8.5/Kinfold/globals.h
ViennaRNA-1.8.5/Kinfold/AUTHORS
ViennaRNA-1.8.5/Kinfold/Laplace/
ViennaRNA-1.8.5/Kinfold/Laplace/extract_data.pl
ViennaRNA-1.8.5/Kinfold/Laplace/README
ViennaRNA-1.8.5/Kinfold/Laplace/seq1_ref.ps
ViennaRNA-1.8.5/Kinfold/Laplace/laplace.sh
ViennaRNA-1.8.5/Kinfold/Laplace/to_boxplot.R
ViennaRNA-1.8.5/Kinfold/Laplace/seq1
ViennaRNA-1.8.5/Kinfold/cache.c
ViennaRNA-1.8.5/Kinfold/config.h.in
ViennaRNA-1.8.5/Kinfold/cmdline.c
ViennaRNA-1.8.5/Kinfold/COPYING
ViennaRNA-1.8.5/Kinfold/configure.in
ViennaRNA-1.8.5/Kinfold/nachbar.c
ViennaRNA-1.8.5/Kinfold/baum.c
ViennaRNA-1.8.5/Kinfold/baum.h
ViennaRNA-1.8.5/install-sh
ViennaRNA-1.8.5/Makefile.am
ViennaRNA-1.8.5/vienna13.par
ViennaRNA-1.8.5/NEWS
ViennaRNA-1.8.5/compile
ViennaRNA-1.8.5/INSTALL
ViennaRNA-1.8.5/ViennaRNA.spec.in
ViennaRNA-1.8.5/Readseq/
ViennaRNA-1.8.5/Readseq/nucleic.std
ViennaRNA-1.8.5/Readseq/Readseq.help
ViennaRNA-1.8.5/Readseq/ureadseq.c.orig
ViennaRNA-1.8.5/Readseq/alphabet.std
ViennaRNA-1.8.5/Readseq/ureadasn.c
ViennaRNA-1.8.5/Readseq/multi.std
ViennaRNA-1.8.5/Readseq/Readme
ViennaRNA-1.8.5/Readseq/upper.std
ViennaRNA-1.8.5/Readseq/readseq.c.orig
ViennaRNA-1.8.5/Readseq/Formats
ViennaRNA-1.8.5/Readseq/readseqSIOW.make
ViennaRNA-1.8.5/Readseq/macinit.r
ViennaRNA-1.8.5/Readseq/Make.com
ViennaRNA-1.8.5/Readseq/Stdfiles
ViennaRNA-1.8.5/Readseq/translate.patch
ViennaRNA-1.8.5/Readseq/ureadseq.c
ViennaRNA-1.8.5/Readseq/ureadseq.h
ViennaRNA-1.8.5/Readseq/readseq.c
ViennaRNA-1.8.5/Readseq/macinit.c
ViennaRNA-1.8.5/Readseq/ureadseq.h.orig
ViennaRNA-1.8.5/Readseq/Makefile
ViennaRNA-1.8.5/Readseq/add.gdemenu
ViennaRNA-1.8.5/Readseq/Make.ncbi
ViennaRNA-1.8.5/ChangeLog
ViennaRNA-1.8.5/Makefile.in
ViennaRNA-1.8.5/missing
ViennaRNA-1.8.5/README
ViennaRNA-1.8.5/RNAforester/
ViennaRNA-1.8.5/RNAforester/configure
ViennaRNA-1.8.5/RNAforester/aclocal.m4
ViennaRNA-1.8.5/RNAforester/TODO
ViennaRNA-1.8.5/RNAforester/install-sh
ViennaRNA-1.8.5/RNAforester/Makefile.am
ViennaRNA-1.8.5/RNAforester/NEWS
ViennaRNA-1.8.5/RNAforester/INSTALL
ViennaRNA-1.8.5/RNAforester/ChangeLog
ViennaRNA-1.8.5/RNAforester/src/
ViennaRNA-1.8.5/RNAforester/src/fold.h
ViennaRNA-1.8.5/RNAforester/src/alignment.h
ViennaRNA-1.8.5/RNAforester/src/ppforestsz.h
ViennaRNA-1.8.5/RNAforester/src/pointer.c
ViennaRNA-1.8.5/RNAforester/src/ppforestali.h
ViennaRNA-1.8.5/RNAforester/src/rna_pro