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文件名称:ABCSMC_sysbio.tar

  • 所属分类：
    Bio-Recognize
  • 标签属性：
    [C/C++] [源码]
  • 上传时间：
    2012-11-16
  • 文件大小：
    1010.54kb
  • 已下载：
    0次
  • 提 供 者：
    Won****
  • 相关连接：
    无
  • 下载说明：
    别用迅雷下载，失败请重下，重下不扣分！
修正介绍说明

介绍说明－－下载内容来自于网络，使用问题请自行百度

基于近似贝叶斯计算思想，用于系统生物学里模块功能搜索，结构筛选，参数区间权重划分。强大之处在于，练习者只须用新的生物case编一个input文件即可。输出量为模型，参数的权重。欲改进者可考虑引进粒子滤波中的权重给定方法。-Approximate Bayesian Computation in

Python with GPU support。
(系统自动生成,下载前可以参看下载内容)

下载文件列表

abc-sysbio-2.04/
abc-sysbio-2.04/doc/
abc-sysbio-2.04/doc/ABC-SysBio-Manual.pdf
abc-sysbio-2.04/PKG-INFO
abc-sysbio-2.04/scripts/
abc-sysbio-2.04/scripts/abc-sysbio-sbml-sum
abc-sysbio-2.04/scripts/run-abc-sysbio
abc-sysbio-2.04/README.txt
abc-sysbio-2.04/setup.py
abc-sysbio-2.04/examples/
abc-sysbio-2.04/examples/Example1/
abc-sysbio-2.04/examples/Example1/input_file_SIR.xml
abc-sysbio-2.04/examples/Example1/data.txt
abc-sysbio-2.04/examples/Example1/input_file_SIR_simulation.xml
abc-sysbio-2.04/examples/Example1/input_file_SIR_x0.xml
abc-sysbio-2.04/examples/Example1/input_file_SIR_x0_normk.xml
abc-sysbio-2.04/examples/Example1/SIRModel1.xml
abc-sysbio-2.04/examples/Example1/SIRModel2.xml
abc-sysbio-2.04/examples/Example1/SIRModel3.xml
abc-sysbio-2.04/examples/Example1/input_file_SIR_normk.xml
abc-sysbio-2.04/examples/Example1/input_file_SIR_auto.xml
abc-sysbio-2.04/examples/Example2/
abc-sysbio-2.04/examples/Example2/input_file_lingrow_restart.xml
abc-sysbio-2.04/examples/Example2/input_file_lingrow_normk.xml
abc-sysbio-2.04/examples/Example2/input_file_lingrow_x0.xml
abc-sysbio-2.04/examples/Example2/input_file_lingrow_simulation.xml
abc-sysbio-2.04/examples/Example2/input_file_lingrow_normk2.xml
abc-sysbio-2.04/examples/Example2/input_file_lingrow_x0_restart.xml
abc-sysbio-2.04/examples/Example2/LinearGrowthModelModified.py
abc-sysbio-2.04/examples/Example2/input_file_lingrow.xml
abc-sysbio-2.04/examples/Example3/
abc-sysbio-2.04/examples/Example3/input_file_dimerisation.xml
abc-sysbio-2.04/examples/Example3/DimerisationDiscreetStochastic.xml
abc-sysbio-2.04/examples/Example3/input_file_dimerisation_auto.xml
abc-sysbio-2.04/examples/Example4/
abc-sysbio-2.04/examples/Example4/logistic.xml
abc-sysbio-2.04/examples/Example4/input_file_pop_sde.xml
abc-sysbio-2.04/examples/Example4/input_file_pop_mjp.xml
abc-sysbio-2.04/examples/Example4/input_file_pop_ode.xml
abc-sysbio-2.04/examples/Example4/immigration-death.xml
abc-sysbio-2.04/examples/Example5/
abc-sysbio-2.04/examples/Example5/input_file_repressilator.xml
abc-sysbio-2.04/examples/Example5/repressilator.xml
abc-sysbio-2.04/examples/Example5/input_file_repressilator_auto.xml
abc-sysbio-2.04/examples/Example6/
abc-sysbio-2.04/examples/Example6/input_file_adaptation.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model1.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model2.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model3.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model4.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model5.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model6.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model7.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model8.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model9.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model10.xml
abc-sysbio-2.04/examples/Example6/three_nodes_model11.xml
abc-sysbio-2.04/examples/Example6/customABC.py
abc-sysbio-2.04/examples/.DS_Store
abc-sysbio-2.04/abcsysbio_parser/
abc-sysbio-2.04/abcsysbio_parser/SDEAndGillespieCUDAParser.py
abc-sysbio-2.04/abcsysbio_parser/ODECUDAWriter.py
abc-sysbio-2.04/abcsysbio_parser/GillespieCUDAWriter.py
abc-sysbio-2.04/abcsysbio_parser/ODECUDAParser.py
abc-sysbio-2.04/abcsysbio_parser/GillespiePythonWriter.py
abc-sysbio-2.04/abcsysbio_parser/CandPythonParser.py
abc-sysbio-2.04/abcsysbio_parser/SDECUDAWriter.py
abc-sysbio-2.04/abcsysbio_parser/CWriter.py
abc-sysbio-2.04/abcsysbio_parser/Writer.py
abc-sysbio-2.04/abcsysbio_parser/ParseAndWrite.py
abc-sysbio-2.04/abcsysbio_parser/ODEPythonWriter.py
abc-sysbio-2.04/abcsysbio_parser/Parser.py
abc-sysbio-2.04/abcsysbio_parser/ParsedModel.py
abc-sysbio-2.04/abcsysbio_parser/SDEPythonWriter.py
abc-sysbio-2.04/abcsysbio_parser/__init__.py
abc-sysbio-2.04/abcsysbio_parser/CUDAParser.py
abc-sysbio-2.04/abcsysbio/
abc-sysbio-2.04/abcsysbio/src/
abc-sysbio-2.04/abcsysbio/src/MilsteinSDESolver.cpp
abc-sysbio-2.04/abcsysbio/src/MilsteinSDESolver.hpp
abc-sysbio-2.04/abcsysbio/src/EulerSDESolver.cpp
abc-sysbio-2.04/abcsysbio/src/EulerSDESolver.hpp
abc-sysbio-2.04/abcsysbio/src/HeunSDESolver.cpp
abc-sysbio-2.04/abcsysbio/src/HeunSDESolver.hpp
abc-sysbio-2.04/abcsysbio/src/makefile
abc-sysbio-2.04/abcsysbio/src/GillespieSolver.cpp
abc-sysbio-2.04/abcsysbio/src/GillespieSolver.hpp
abc-sysbio-2.04/abcsysbio/src/SDESolver.cpp
abc-sysbio-2.04/abcsysbio/src/SDESolver.hpp
abc-sysbio-2.04/abcsysbio/src/Solver.cpp
abc-sysbio-2.04/abcsysbio/src/Solver.hpp
abc-sysbio-2.04/abcsysbio/src/ODESolver.cpp
abc-sysbio-2.04/abcsysbio/src/ODESolver.hpp
abc-sysbio-2.04/abcsysbio/src/NM_SHLIB_BUILD.sh
abc-sysbio-2.04/abcsysbio/src/install_nm.sh
abc-sysbio-2.04/abcsysbio/src/newmat11.tar.gz
abc-sysbio-2.04/abcsysbio/data.py
abc-sysbio-2.04/abcsysbio/model_cu.py
abc-sysbio-2.04/abcsysbio/model_py.py
abc-sysbio-2.04/abcsysbio/parse_info.py
abc-sysbio-2.04/abcsysbio/checkInputArguments.py
abc-sysbio-2.04/abcsysbio/statistics.py
abc-sysbio-2.04/abcsysbio/kernels.py
abc-sysbio-2.04/abcsysbio/getResults.py
abc-sysbio-2.04/abcsysbio/sdeint.py
abc-sysbio-2.04/abcsysbio/input_output.py
abc-sysbio-2.04/abcsysbi

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