文件名称:libsequence-1.7.4
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- 上传时间:2013-08-03
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一个用来计算进化遗传分析的库.重点在于对snp数据的分析和序列驱异的计算-libsequence is a C++ library designed to aid writing applications for genomics and evolutionary genetics. The library is intended to be viewed as a "BioC++" akin to the bioperl project, although the scope of libsequence is limited in comparison. the focus is on biological computation, such as the analysis of SNP data and sequence divergence, and the analysis of data generated from coalescent simulation.
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libsequence-1.7.4/
libsequence-1.7.4/acinclude.m4
libsequence-1.7.4/aclocal.m4
libsequence-1.7.4/AUTHORS
libsequence-1.7.4/ChangeLog
libsequence-1.7.4/config.guess
libsequence-1.7.4/config.h.in
libsequence-1.7.4/config.sub
libsequence-1.7.4/configure
libsequence-1.7.4/configure.in
libsequence-1.7.4/COPYING
libsequence-1.7.4/debian/
libsequence-1.7.4/debian/changelog
libsequence-1.7.4/debian/changelog~
libsequence-1.7.4/debian/control
libsequence-1.7.4/debian/copyright
libsequence-1.7.4/debian/crontab.ex
libsequence-1.7.4/debian/dirs
libsequence-1.7.4/debian/diversions.ex
libsequence-1.7.4/debian/inetd.conf.ex
libsequence-1.7.4/debian/info.ex
libsequence-1.7.4/debian/init.d.ex
libsequence-1.7.4/debian/libsequence1.files
libsequence-1.7.4/debian/manpage.1.ex
libsequence-1.7.4/debian/menu.ex
libsequence-1.7.4/debian/README.debian
libsequence-1.7.4/debian/rules
libsequence-1.7.4/debian/watch.ex
libsequence-1.7.4/depcomp
libsequence-1.7.4/doc/
libsequence-1.7.4/doc/images/
libsequence-1.7.4/doc/images/2subs
libsequence-1.7.4/doc/images/2subs.jpg
libsequence-1.7.4/doc/images/2subs.pdf
libsequence-1.7.4/doc/images/3subs
libsequence-1.7.4/doc/images/3subs.jpg
libsequence-1.7.4/doc/images/3subs.pdf
libsequence-1.7.4/doc/images/temp/
libsequence-1.7.4/doc/libsequence.doxygen
libsequence-1.7.4/doc/Makefile
libsequence-1.7.4/examples/
libsequence-1.7.4/examples/baseComp.cc
libsequence-1.7.4/examples/bottleneck.cc
libsequence-1.7.4/examples/codons.cc
libsequence-1.7.4/examples/correlations.cc
libsequence-1.7.4/examples/critical_values.cc
libsequence-1.7.4/examples/FastaExplicit.cc
libsequence-1.7.4/examples/fragments.cc
libsequence-1.7.4/examples/freerec.cc
libsequence-1.7.4/examples/gestimator.cc
libsequence-1.7.4/examples/getopt.c
libsequence-1.7.4/examples/getopt.h
libsequence-1.7.4/examples/getopt1.c
libsequence-1.7.4/examples/int_handler.cc
libsequence-1.7.4/examples/int_handler.hpp
libsequence-1.7.4/examples/Makefile
libsequence-1.7.4/examples/ms--.cc
libsequence-1.7.4/examples/msbeta.cc
libsequence-1.7.4/examples/msstats.cc
libsequence-1.7.4/examples/PolyTableIterators.cc
libsequence-1.7.4/examples/slidingWindow.cc
libsequence-1.7.4/examples/slidingWindow2.cc
libsequence-1.7.4/examples/translateTest.cc
libsequence-1.7.4/examples/ufs.cc
libsequence-1.7.4/examples/valid_dna.cc
libsequence-1.7.4/INSTALL
libsequence-1.7.4/install-sh
libsequence-1.7.4/libsequence2.lsm.in
libsequence-1.7.4/libsequence2.spec.in
libsequence-1.7.4/ltmain.sh
libsequence-1.7.4/m4/
libsequence-1.7.4/m4/libtool.m4
libsequence-1.7.4/m4/ltoptions.m4
libsequence-1.7.4/m4/ltsugar.m4
libsequence-1.7.4/m4/ltversion.m4
libsequence-1.7.4/m4/lt~obsolete.m4
libsequence-1.7.4/Makefile.am
libsequence-1.7.4/Makefile.in
libsequence-1.7.4/missing
libsequence-1.7.4/mkinstalldirs
libsequence-1.7.4/NEWS
libsequence-1.7.4/README
libsequence-1.7.4/Sequence/
libsequence-1.7.4/Sequence/Alignment.hpp
libsequence-1.7.4/Sequence/AlignStream.hpp
libsequence-1.7.4/Sequence/bits/
libsequence-1.7.4/Sequence/bits/Alignment.tcc
libsequence-1.7.4/Sequence/bits/AlignStream.tcc
libsequence-1.7.4/Sequence/bits/Clustalw.tcc
libsequence-1.7.4/Sequence/bits/Correlations.tcc
libsequence-1.7.4/Sequence/bits/CountingOperators.tcc
libsequence-1.7.4/Sequence/bits/descriptiveStats.tcc
libsequence-1.7.4/Sequence/bits/Makefile.am
libsequence-1.7.4/Sequence/bits/Makefile.in
libsequence-1.7.4/Sequence/bits/phylipData.tcc
libsequence-1.7.4/Sequence/bits/PolySites.tcc
libsequence-1.7.4/Sequence/bits/PolyTable.tcc
libsequence-1.7.4/Sequence/bits/PolyTableSlice.tcc
libsequence-1.7.4/Sequence/bits/Snn.tcc
libsequence-1.7.4/Sequence/Clustalw.hpp
libsequence-1.7.4/Sequence/Coalescent/
libsequence-1.7.4/Sequence/Coalescent/bits/
libsequence-1.7.4/Sequence/Coalescent/bits/Coalesce.tcc
libsequence-1.7.4/Sequence/Coalescent/bits/DemographicModels.tcc
libsequence-1.7.4/Sequence/Coalescent/bits/Makefile.am
libsequence-1.7.4/Sequence/Coalescent/bits/Makefile.in
libsequence-1.7.4/Sequence/Coalescent/bits/Mutation.tcc
libsequence-1.7.4/Sequence/Coalescent/bits/Recombination.tcc
libsequence-1.7.4/Sequence/Coalescent/bits/Trajectories.tcc
libsequence-1.7.4/Sequence/Coalescent/Coalesce.hpp
libsequence-1.7.4/Sequence/Coalescent/Coalescent.hpp
libsequence-1.7.4/Sequence/Coalescent/DemographicModels.hpp
libsequence-1.7.4/Sequence/Coalescent/FragmentsRescaling.hpp
libsequence-1.7.4/Sequence/Coalescent/Initialize.hpp
libsequence-1.7.4/Sequence/Coalescent/Makefile.am
libsequence-1.7.4/Sequence/Coalescent/Makefile.in
libsequence-1.7.4/Sequence/Coalescent/Mutation.hpp
libsequence-1.7.4/Sequence/Coalescent/NeutralSample.hpp
libsequence-1.7.4/Sequence/Coalescent/Recombination.hpp
libsequence-1.7.4/Sequence/Coalescent/SimTypes.hpp
libsequence-1.7.4/Sequence/Coalescent/Trajectories.hpp
libsequence-1.7.4/Sequence/Coalescent/TreeOperations.hpp
libsequence-1.7.4/Sequence/CodonTable.hpp
libsequence-1.7.4/Sequence/Comeron95.hpp
libsequence-1.7.4/Sequence/Comparisons.hpp
libsequence-1.7.4/Sequence/ComplementBase.hpp
libsequence-1.7.4/Sequence/Correlations.hpp
libsequence-1.7.4/Sequence/CountingOperators.hpp
libsequence-1.7.4/Sequence/Crit.hpp
libsequence-1.7.4/acinclude.m4
libsequence-1.7.4/aclocal.m4
libsequence-1.7.4/AUTHORS
libsequence-1.7.4/ChangeLog
libsequence-1.7.4/config.guess
libsequence-1.7.4/config.h.in
libsequence-1.7.4/config.sub
libsequence-1.7.4/configure
libsequence-1.7.4/configure.in
libsequence-1.7.4/COPYING
libsequence-1.7.4/debian/
libsequence-1.7.4/debian/changelog
libsequence-1.7.4/debian/changelog~
libsequence-1.7.4/debian/control
libsequence-1.7.4/debian/copyright
libsequence-1.7.4/debian/crontab.ex
libsequence-1.7.4/debian/dirs
libsequence-1.7.4/debian/diversions.ex
libsequence-1.7.4/debian/inetd.conf.ex
libsequence-1.7.4/debian/info.ex
libsequence-1.7.4/debian/init.d.ex
libsequence-1.7.4/debian/libsequence1.files
libsequence-1.7.4/debian/manpage.1.ex
libsequence-1.7.4/debian/menu.ex
libsequence-1.7.4/debian/README.debian
libsequence-1.7.4/debian/rules
libsequence-1.7.4/debian/watch.ex
libsequence-1.7.4/depcomp
libsequence-1.7.4/doc/
libsequence-1.7.4/doc/images/
libsequence-1.7.4/doc/images/2subs
libsequence-1.7.4/doc/images/2subs.jpg
libsequence-1.7.4/doc/images/2subs.pdf
libsequence-1.7.4/doc/images/3subs
libsequence-1.7.4/doc/images/3subs.jpg
libsequence-1.7.4/doc/images/3subs.pdf
libsequence-1.7.4/doc/images/temp/
libsequence-1.7.4/doc/libsequence.doxygen
libsequence-1.7.4/doc/Makefile
libsequence-1.7.4/examples/
libsequence-1.7.4/examples/baseComp.cc
libsequence-1.7.4/examples/bottleneck.cc
libsequence-1.7.4/examples/codons.cc
libsequence-1.7.4/examples/correlations.cc
libsequence-1.7.4/examples/critical_values.cc
libsequence-1.7.4/examples/FastaExplicit.cc
libsequence-1.7.4/examples/fragments.cc
libsequence-1.7.4/examples/freerec.cc
libsequence-1.7.4/examples/gestimator.cc
libsequence-1.7.4/examples/getopt.c
libsequence-1.7.4/examples/getopt.h
libsequence-1.7.4/examples/getopt1.c
libsequence-1.7.4/examples/int_handler.cc
libsequence-1.7.4/examples/int_handler.hpp
libsequence-1.7.4/examples/Makefile
libsequence-1.7.4/examples/ms--.cc
libsequence-1.7.4/examples/msbeta.cc
libsequence-1.7.4/examples/msstats.cc
libsequence-1.7.4/examples/PolyTableIterators.cc
libsequence-1.7.4/examples/slidingWindow.cc
libsequence-1.7.4/examples/slidingWindow2.cc
libsequence-1.7.4/examples/translateTest.cc
libsequence-1.7.4/examples/ufs.cc
libsequence-1.7.4/examples/valid_dna.cc
libsequence-1.7.4/INSTALL
libsequence-1.7.4/install-sh
libsequence-1.7.4/libsequence2.lsm.in
libsequence-1.7.4/libsequence2.spec.in
libsequence-1.7.4/ltmain.sh
libsequence-1.7.4/m4/
libsequence-1.7.4/m4/libtool.m4
libsequence-1.7.4/m4/ltoptions.m4
libsequence-1.7.4/m4/ltsugar.m4
libsequence-1.7.4/m4/ltversion.m4
libsequence-1.7.4/m4/lt~obsolete.m4
libsequence-1.7.4/Makefile.am
libsequence-1.7.4/Makefile.in
libsequence-1.7.4/missing
libsequence-1.7.4/mkinstalldirs
libsequence-1.7.4/NEWS
libsequence-1.7.4/README
libsequence-1.7.4/Sequence/
libsequence-1.7.4/Sequence/Alignment.hpp
libsequence-1.7.4/Sequence/AlignStream.hpp
libsequence-1.7.4/Sequence/bits/
libsequence-1.7.4/Sequence/bits/Alignment.tcc
libsequence-1.7.4/Sequence/bits/AlignStream.tcc
libsequence-1.7.4/Sequence/bits/Clustalw.tcc
libsequence-1.7.4/Sequence/bits/Correlations.tcc
libsequence-1.7.4/Sequence/bits/CountingOperators.tcc
libsequence-1.7.4/Sequence/bits/descriptiveStats.tcc
libsequence-1.7.4/Sequence/bits/Makefile.am
libsequence-1.7.4/Sequence/bits/Makefile.in
libsequence-1.7.4/Sequence/bits/phylipData.tcc
libsequence-1.7.4/Sequence/bits/PolySites.tcc
libsequence-1.7.4/Sequence/bits/PolyTable.tcc
libsequence-1.7.4/Sequence/bits/PolyTableSlice.tcc
libsequence-1.7.4/Sequence/bits/Snn.tcc
libsequence-1.7.4/Sequence/Clustalw.hpp
libsequence-1.7.4/Sequence/Coalescent/
libsequence-1.7.4/Sequence/Coalescent/bits/
libsequence-1.7.4/Sequence/Coalescent/bits/Coalesce.tcc
libsequence-1.7.4/Sequence/Coalescent/bits/DemographicModels.tcc
libsequence-1.7.4/Sequence/Coalescent/bits/Makefile.am
libsequence-1.7.4/Sequence/Coalescent/bits/Makefile.in
libsequence-1.7.4/Sequence/Coalescent/bits/Mutation.tcc
libsequence-1.7.4/Sequence/Coalescent/bits/Recombination.tcc
libsequence-1.7.4/Sequence/Coalescent/bits/Trajectories.tcc
libsequence-1.7.4/Sequence/Coalescent/Coalesce.hpp
libsequence-1.7.4/Sequence/Coalescent/Coalescent.hpp
libsequence-1.7.4/Sequence/Coalescent/DemographicModels.hpp
libsequence-1.7.4/Sequence/Coalescent/FragmentsRescaling.hpp
libsequence-1.7.4/Sequence/Coalescent/Initialize.hpp
libsequence-1.7.4/Sequence/Coalescent/Makefile.am
libsequence-1.7.4/Sequence/Coalescent/Makefile.in
libsequence-1.7.4/Sequence/Coalescent/Mutation.hpp
libsequence-1.7.4/Sequence/Coalescent/NeutralSample.hpp
libsequence-1.7.4/Sequence/Coalescent/Recombination.hpp
libsequence-1.7.4/Sequence/Coalescent/SimTypes.hpp
libsequence-1.7.4/Sequence/Coalescent/Trajectories.hpp
libsequence-1.7.4/Sequence/Coalescent/TreeOperations.hpp
libsequence-1.7.4/Sequence/CodonTable.hpp
libsequence-1.7.4/Sequence/Comeron95.hpp
libsequence-1.7.4/Sequence/Comparisons.hpp
libsequence-1.7.4/Sequence/ComplementBase.hpp
libsequence-1.7.4/Sequence/Correlations.hpp
libsequence-1.7.4/Sequence/CountingOperators.hpp
libsequence-1.7.4/Sequence/Crit.hpp
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