搜索资源列表
gc_count
- 统计fasta格式文件中每条DNA序列中的GC含量，并且可以统计DNA序列的GC分布-# this program is used to count the gc content in the squences.
Seq_Outof_FastaV2.01
- 可以直接从fasta格式的文件中读取氨基酸序列或者碱基序列，方便matlab读取-Directly from the FASTA file format to read the amino acid sequence or base sequence, to facilitate reading matlab
myzip
- DNA files format is fasta 压缩软件-DNA files format is fasta
HMM
- VisualBasic 的 HMM 范例 HMM模型，Viterbi，滑动窗算法唐纳 Helland（定位在人类的DNA基因的目的)-HMM、Viterbi、and Sliding Window Algorithms (for purposes of locating genes in human DNA) by Tanner Helland This project demonstrates use of a Hidden Markov Model (HMM) to define
main
- FASTA 算法C++实现，比较初级，没有多少技术含量-FASTA algorithm in C++
FastaTool
- Fasta序列处理工具：包含蛋白或者DNA序列的编辑，获取局部序列，CDS翻译成蛋白，序列格式化功能等-The Fasta sequence processing tools: contain protein or DNA sequence editor for local sequence, CDS translated into protein sequence formatting functions
phd2
- Phd2Fasta：把phd格式的文件转fasta格式的质量和序列文件-Phd2Fasta: phd format file the fasta format quality and sequence file
sequtoarray
- 将一个fasta格式的序列文件中所有序列提取出来以数组形式储存起来，有几条序列就存几个数组，同时序列的名字也要一起提供-Extracted all sequences in a fasta sequence file format to store an array, there are a few sequences on deposit several array, while the name of the sequence should be provided with
out
- 将fasta序列读出序列和文件名后，经分析比对，得出最终结果输出到文件的函数-The fasta sequences read out the sequence and file name, after analysis, to arrive at a final result output to a file function
match
- perl编写。从NCBI中下载的编码区序列，比如整个大肠杆菌编码序列，下载下来是fasta格式的一个文档，这个程序可以让你从中提取想要的gene name。把想提取的gene name放到一个文本中，比如基因序列.txt-written in perl. Downloaded from NCBI coding region sequence, for example, the entire coding sequence of E. coli, downloaded the fasta form
Antisense.cpp
- 寻找DNA互补链，输入是普通的得不能再普通的fasta文件。输出也是fasta文件-Get the sequence of antisense strands. Both the inputs and outputs would be the same fasta files
fasta
- 使用CodeBlocks编写FASTA算法，对基因序列进行比对。-FASTA algorithm using CodeBlocks writing on gene sequences for comparison.
seqtk-Introduction
- seqtk的操作说明，seqtk是处理fasta格式文件的重要命令，可以完成fastq和fasta之间的转换- seqtk operating instructions, seqtk is an important command processing fasta format files, you can complete the conversion between fastq and fasta
script1.tar
- 为了加入这个网站，我把心血分享给大家，绝对都是原创！ A：mkdatabas0.cpp 做blast前对大的非冗余NR或者是uniref数据库的预处理。为每条序列计算出等长的（长度为20*19/2=210）的数值数组。用来后期比较各个序列间的距离做准备。 B：mkdatabas.cpp 是通过比较要blast对象的那条序列和reference序列的距离，提出距离过远序列。用得到的新数据库做blast。 C：dl_fa.pl程序比较简单，但很实用，可以批量的从网站下载想要的fasta序